Helper function to extract variance explained information from a Seurat object.
Usage
get_pca_variance(object, n_pcs = NULL)
Arguments
- object
Seurat object with PCA reduction.
- n_pcs
numeric. Number of top PCs to return. If NULL, returns all PCs.
Value
data.frame with PC number, variance explained percentage, and cumulative variance.
Examples
if (FALSE) { # \dontrun{
get_pca_variance(seurat_object, n_pcs = 10)
get_pca_variance(seurat_object)
} # }
